Weekly Notes for Week 44

This week(44) we will still focus on Petri Nets, applications of how to use them in Chemistry and Systems Biology will be presented. Therefore the weekly notes are very similar to the weekly notes of week 43.

• Mandatory Reading:

  • (Applications of MCB): Minimum Cycle Bases and Their Applications, Franziska Berger, Peter Gritzmann, and Sven de Vries - only section 3.2 is mandatory – (Petri Nets): The slides for the lectures should cover everything.

• Recommended Reading:

  – Murata, Tadao:Petri Nets: Properties, Analysis and Applications. In: Proceedings of the IEEE, Vol. 77, No. 4, pages 541-580. April 1989.

• Voluntary Reading:

  – Monika Heiner, David Gilbert, Robin Donaldson: Petri Nets for Systems and Synthetic Biology. SFM 2008: 215-264 – Javier Esparza: Decidability and Complexity of Petri Net Problems - An Introduction. Petri Nets 1996: 374-428